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CutePeaks

Published by Labsquare

Standalone Sanger trace viewer

Open sourceGPL-3.0-or-later

Highlights

  • Visualizes Sanger sequencing chromatogram files.
  • Displays base calls and signal peaks for DNA sequence verification.
  • Provides a lightweight interface for inspecting raw trace data.

About this application

CutePeaks is a standalone application developed for the visualization of Sanger sequencing trace files. It allows researchers and laboratory personnel to open and inspect chromatogram files directly on Linux platforms. The software renders the base calls and signal peaks associated with DNA sequencing data, providing a clear view of the underlying nucleotide sequences. It is designed to handle standard trace file formats, enabling users to verify the quality of sequencing results through visual inspection of the peak patterns.

The application functions as a dedicated viewer, focusing on the display and navigation of trace data. It does not include integrated tools for sequence assembly or complex bioinformatics analysis, but rather serves as a lightweight utility for quick assessment of individual trace files. Users can navigate through the sequence data and observe the signal intensity for each base call, which is essential for identifying potential sequencing errors or ambiguities in the raw data output.

Linux

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